b1640
 
Information for b1640, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1716090-1716338
-
CDS
orf; hypothetical protein
1716517-1717626
-
CDS
b1640
orf; hypothetical protein
1717900-1718367
+
CDS
putative outer membrane protein
 
Reported regulatory sites for b1640:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.088
1717830-1717846 R
gtcaa AGTATATGGCATATGTG aatcc
-
0
-
1.088
1717666-1717682 R
gtatt CACGAAAAGTTTATGTT tgagt
-
0
-
0.777
1717758-1717773 R
gatca ACCAATTATAAACAAA acatt
-
0
-
0.777
1717699-1717714 R
ctacc AACGGTAAAAATCGGT cattc
-
0
-
0.396
1717872-1717888 R
atctc CTGTTCACCATGAAACG ccacg
-
0
-
0.396
1717781-1717797 R
atgag CAAATCATAATGAAAGT aggat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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