|
b1722
|
| |
| Information
for b1722, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1801602-1803017
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1803349-1804107
|
-
|
CDS
|
b1722
|
|
orf; hypothetical protein
|
|
1804394-1805323
|
+
|
CDS
|
|
|
6-phosphofructokinase II; suppressor of pfkA
|
|
| |
Reported regulatory
sites for b1722:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.651
|
1804365-1804380 R
|
cctat AGGCTGATTTCAGTCT ggcac
|
-
|
0
|
-
|
|
|
|
|
3.570
|
1804322-1804338 R
|
gaaga AATTAACAATATGATTT attgg
|
-
|
0
|
-
|
|
|
|
|
3.570
|
1804238-1804254 R
|
atgct TATTCAAAAAATGAAAT aagaa
|
-
|
0
|
-
|
|
|
|
|
2.719
|
1804108-1804126 R
|
ttttg TTGTACGGACTCTTGATAA atgaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|