b1770
 
Information for b1770, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1850645-1852003
-
CDS
putative transport protein
1852120-1852878
-
CDS
b1770
putative DEOR-type transcriptional regulator
1853015-1853995
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b1770:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.898
1852980-1853000 R
acgat TCACCTCTGTTTCTGTGAAAA ctgtg
-
0
-
0.898
1852918-1852938 R
gaaag TAAACATCGGTTATGCGATAA tcgcg
-
0
-
0.082
1852952-1852968 R
tgaaa ATCTGTGATTCAAACAG gttat
-
0
-
0.082
1852895-1852911 R
cgcgc TAATGTGATGTAAAAAG ataca
-
0
-
 
Critical MAP values:
p=0.01
6.09
p=0.05
4.94
p=0.1
4.37
p=0.2
3.74

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