|
b1815
|
| |
| Information
for b1815, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1894956-1896320
|
+
|
CDS
|
|
|
L-serine deaminase
|
|
1896421-1898049
|
+
|
CDS
|
b1815
|
|
orf; hypothetical protein
|
|
1898053-1899609
|
-
|
CDS
|
|
|
putative transport protein
|
|
| |
Reported regulatory
sites for b1815:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.249
|
1896332-1896354
|
ttact CGCCCATCTGCAACGGATGGGCG aattt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.434
|
1896392-1896412
|
ttccc CACTACACTTCCACTGTTGCG tcagg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|