b1821
 
Information for b1821, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1902825-1903283
+
CDS
orf; hypothetical protein
1903658-1904278
+
CDS
b1821
orf; hypothetical protein
1904275-1905084
-
CDS
putative enzyme
 
Reported regulatory sites for b1821:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.342
1903290-1903309
ttatg AATTTAGCCAAAGCTATGTT tagtg
-
0
-
6.342
1903330-1903349
aatca GACATAGCTTAGGCTATATT acctc
-
0
-
5.413
1903403-1903421
atcca AATGAAAATCGTTATCAAT aaagc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.208
1903521-1903544
ccgga AATGTACGTGTCAACATACTCGTT gcaaa
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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