b1828
 
Information for b1828, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1907332-1908123
-
CDS
putative regulator
1908189-1909673
+
CDS
b1828
putative transport protein
1909719-1910600
-
CDS
heat shock protein; integral membrane protein
 
Reported regulatory sites for b1828:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.627
1908148-1908171
gtttt ATAAAAATCAGAACTGTTTTTTAT tataa
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.239
1908126-1908146
cattt ATCACCTCATTGCGAGTGTTT tataa
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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