b1841
 
Information for b1841, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1921743-1922615
-
CDS
putative resistance protein
1922619-1922993
-
CDS
b1841
orf; hypothetical protein
1923132-1923362
+
CDS
DNA polymerase III; theta subunit
 
Reported regulatory sites for b1841:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.725
1923007-1923030 R
ttatg CTCTGTAAAAAAGTTATTACAAAA aggaa
-
0
-
4.560
1923051-1923070 R
agccg GAATTGATGATCCTCGACTC agaca
-
0
-
1.747
1923023-1923045 R
agaca TTAGACAAGGTTATGCTCTGTAA aaaag
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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