b1971
 
Information for b1971, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2036978-2037391
+
CDS
orf; hypothetical protein
2037500-2038504
+
CDS
b1971
putative reductase
2038505-2039140
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for b1971:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.279
2037391-2037406
agtta ATGCATAAATATGTAA aagca
-
0
-
1.279
2037407-2037422
tgtaa AAGCAGATCTCTGCTA ctgtt
-
0
-
0.329
2037443-2037459
ctccc TGACAGATTAACAGTAA acggc
-
0
-
0.329
2037467-2037483
ggctc TTGCTGGCTAACGACAA aaaag
-
0
-
0.009
2037424-2037447
gctac TGTTAGGGAGGACACTCCCTGACA gatta
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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