|
b1983
|
| |
| Information
for b1983, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2053083-2054537
|
+
|
CDS
|
|
|
AMP nucleosidase
|
|
2054880-2055596
|
+
|
CDS
|
b1983
|
|
orf; hypothetical protein
|
|
2056049-2056124
|
-
|
tRNA
|
|
|
Asparagine tRNA
|
|
| |
Reported regulatory
sites for b1983:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.490
|
2054844-2054860
|
tttac CAGTAATGTAAATAAAT tttcg
|
-
|
0
|
-
|
|
|
|
|
2.202
|
2054802-2054822
|
tcctg TTATGATATAATATGCTGAAT taaca
|
-
|
0
|
-
|
|
|
|
|
1.666
|
2054535-2054556
|
tccga TAATAAGTTCTGAACCTTCTTA tcaga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.40
|
|
p=0.05
|
4.29
|
|
p=0.1
|
3.77
|
|
p=0.2
|
3.19
|
|
|