b2016
 
Information for b2016, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2085351-2086301
-
CDS
putative transcriptional regulator LYSR-type
2086326-2087150
-
CDS
b2016
putative enzyme of sugar metabolism
2087484-2087762
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b2016:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.091
2087209-2087225 R
agatt CATTCATAGAATGAATT gtcag
-
0
-
1.732
2087394-2087416 R
attgt TAAAAAGATCAATGAACTTATCA aagat
-
0
-
1.016
2087202-2087217 R
tcata GAATGAATTGTCAGTT ttgat
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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