b2080
 
Information for b2080, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2162298-2163020
+
CDS
transcriptional response regulatory protein (sensor BaeS)
2163172-2163543
+
CDS
b2080
orf; hypothetical protein
2163690-2165051
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for b2080:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.559
2163109-2163128
catta TCTCTCCGCCCTGGCAGGCA tcaga
-
0
REP149b (10)
0.279
2163057-2163076
ggcgt TCAGACCAGATCCGGCAACA ttatc
-
0
REP149a (16)
0.279
2163077-2163096
caaca TTATCCCACGCATGGTCAGC aaact
-
0
REP149b (14)
 
Critical MAP values:
p=0.01
4.11
p=0.05
2.92
p=0.1
2.48
p=0.2
2.01

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