|
b2086
|
| |
| Information
for b2086, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2166011-2166388
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2166734-2167633
|
+
|
CDS
|
b2086
|
|
orf; hypothetical protein
|
|
2167715-2168161
|
-
|
CDS
|
|
|
split galactitol utilization operon repressor; interrupted
|
|
| |
Reported regulatory
sites for b2086:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.047
|
2166417-2166436
|
ataat AAATGTTCTGTACAACATTT cctac
|
-
|
0
|
-
|
|
|
|
|
1.047
|
2166696-2166715
|
gctct ACACTATCTACAGACCAATC ataaa
|
-
|
0
|
-
|
|
|
|
|
0.972
|
2166530-2166553
|
agttg AATATTAGGTATATGCTCTTTTTT gaaat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|