|
b2249
|
| |
| Information
for b2249, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2359449-2360231
|
-
|
CDS
|
|
|
putative regulator
|
|
2360451-2361653
|
-
|
CDS
|
b2249
|
|
orf; hypothetical protein
|
|
2361753-2362316
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b2249:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.683
|
2361668-2361689 R
|
tttgc GTTATAGTGATTCGATAACAAA agcag
|
-
|
0
|
-
|
|
|
|
|
1.036
|
2361734-2361749 R
|
gatcc CTTCCGGCGCGGCATT ctgtc
|
-
|
0
|
-
|
|
|
|
|
1.036
|
2361699-2361714 R
|
agttt CTTACTACGCCTTATC tccct
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|