b2249
 
Information for b2249, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2359449-2360231
-
CDS
putative regulator
2360451-2361653
-
CDS
b2249
orf; hypothetical protein
2361753-2362316
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b2249:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.683
2361668-2361689 R
tttgc GTTATAGTGATTCGATAACAAA agcag
-
0
-
1.036
2361734-2361749 R
gatcc CTTCCGGCGCGGCATT ctgtc
-
0
-
1.036
2361699-2361714 R
agttt CTTACTACGCCTTATC tccct
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

Click here to go back