|
b2258
|
| |
| Information
for b2258, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2368928-2370580
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
2370630-2371298
|
+
|
CDS
|
b2258
|
|
putative transport/receptor protein
|
|
2371292-2371588
|
-
|
CDS
|
|
|
polymyxin resistance protein B
|
|
| |
Reported regulatory
sites for b2258:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.281
|
2370582-2370605
|
atgat CTGGCTAACATTAGTCTTTGCCAG cttgc
|
-
|
0
|
-
|
|
-
|
|
|
2.668
|
2370608-2370629
|
cagct TGCTTAGCGTTGCCGGGCAGTT gtgtc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|