b2290
 
Information for b2290, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2403723-2404661
-
CDS
NADH dehydrogenase transcriptional regulator; LysR family
2405581-2406798
+
CDS
b2290
putative aminotransferase
2406882-2407481
+
CDS
putative alpha helix protein
 
Reported regulatory sites for b2290:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.226
2405149-2405166
aaacc TTTTTGAATATTAAATAA taatt
-
0
-
3.140
2405500-2405517
tcaaa ACACCGTCCTGGGGGAGT acatt
-
0
-
3.140
2405534-2405551
agctg ACTTCCACGGCAGGGAGT ggcga
-
0
-
1.306
2405435-2405451
catta TTAAGTTATTAACAGCA caatc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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