|
b2291
|
| |
| Information
for b2291, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2405581-2406798
|
+
|
CDS
|
|
|
putative aminotransferase
|
|
2406882-2407481
|
+
|
CDS
|
b2291
|
|
putative alpha helix protein
|
|
2407540-2409372
|
-
|
CDS
|
|
|
putative transport protein
|
|
| |
Reported regulatory
sites for b2291:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.213
|
2406855-2406876
|
gacct GATGATGTCATCATACGTAAGG tcact
|
-
|
0
|
-
|
|
|
|
|
1.125
|
2406796-2406814
|
agctg TAATCTTAATTTCACTGCC ggaga
|
-
|
0
|
REPt167 (3)
|
|
|
|
|
0.373
|
2406819-2406836
|
cggag ATTGCATCCGGCAGCGTT atccc
|
-
|
0
|
REPt167 (12)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|