|
b2295
|
| |
| Information
for b2295, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2410120-2410632
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2410697-2411152
|
-
|
CDS
|
b2295
|
|
orf; hypothetical protein
|
|
2411490-2412692
|
+
|
CDS
|
|
|
acetate kinase
|
|
| |
Reported regulatory
sites for b2295:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.248
|
2411399-2411419 R
|
gacac CGACATTTATGATTAACATCA tgcac
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.091
|
2411456-2411479 R
|
tacct ATAATTGATACGTGGCTAAAAAAA cgtca
|
-
|
0
|
-
|
|
|
|
|
4.091
|
2411365-2411388 R
|
tgcaa ATTTTTTTTGCATGATGGAAGAAA tatct
|
-
|
0
|
-
|
|
|
|
|
3.828
|
2411173-2411192 R
|
tttgc ACAAATTTTTGAATCTTTAT atgtg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|