b2340
 
Information for b2340, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2453103-2453666
-
CDS
putative fimbrial-like protein
2454347-2454832
-
CDS
b2340
orf; hypothetical protein
2455035-2457179
-
CDS
putative enzyme
 
Reported regulatory sites for b2340:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.144
2454929-2454946 R
gaggt AAAAAACAGCGTTTCATT cggtg
-
0
-
2.373
2454916-2454932 R
cgttt CATTCGGTGAATGGATA aggca
-
0
-
2.373
2454842-2454858 R
gggcg AATCTGGTTAACAAAAG cggtg
-
0
-
1.629
2454862-2454885 R
tttct CTGGTTTCAGATGAAAGAAAACGG gcgaa
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

Click here to go back