b2342
 
Information for b2342, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2455035-2457179
-
CDS
putative enzyme
2457179-2458489
-
CDS
b2342
putative acyltransferase
2458670-2458978
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b2342:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.623
2458516-2458532 R
ctatg ATCAGGTCAGACCACTT tattt
-
0
-
3.767
2458536-2458558 R
ggcta AATGTAAAAAAATGGTTAAGACT atgat
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.258
2458642-2458665 R
attcc TCTCGGGTACGTACGCCCCTGTCA gttgc
-
0
-
0.258
2458579-2458602 R
ttttc TCTCTGTGTCATAGCTCCCACTTT ccctt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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