|
b2343
|
| |
| Information
for b2343, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2457179-2458489
|
-
|
CDS
|
|
|
putative acyltransferase
|
|
2458670-2458978
|
-
|
CDS
|
b2343
|
|
orf; hypothetical protein
|
|
2459320-2460666
|
+
|
CDS
|
|
|
transport of long-chain fatty acids; sensitivity to phage T2
|
|
| |
Reported regulatory
sites for b2343:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.511
|
2459273-2459289 R
|
aacta TGTTACGTGCTGTAACA ggagc
|
ompR
|
17
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.562
|
2459151-2459173 R
|
tatct TTTTTCAAATATGATCTAAGAAA cgcga
|
ompR
|
23
|
-
|
|
|
|
|
5.378
|
2459057-2459080 R
|
cattt TTAAGTGTGATTTCGGTCACTTAT ccgat
|
ompR
|
20
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|