|
b2434
|
| |
| Information
for b2434, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2549297-2549752
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2549733-2550269
|
-
|
CDS
|
b2434
|
|
orf; hypothetical protein
|
|
2550372-2551241
|
+
|
CDS
|
|
|
N-acetylmuramoyl-l-alanine amidase I
|
|
| |
Reported regulatory
sites for b2434:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.589
|
2550312-2550332 R
|
tatat CGTATCGCGTAATCCGTTACG acggt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.827
|
2550278-2550300 R
|
tgctg TTGAGAATTGTTTTACTTTTCAT ttcaa
|
-
|
0
|
-
|
|
|
|
|
4.102
|
2550333-2550354 R
|
gtaat AATAAAGTTCCAGATGTTATAT cgtat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|