|
b2475
|
| |
| Information
for b2475, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2591864-2593879
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2593894-2594757
|
-
|
CDS
|
b2475
|
|
orf; hypothetical protein
|
|
2594925-2595638
|
-
|
CDS
|
|
|
phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase
|
|
| |
Reported regulatory
sites for b2475:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.527
|
2594811-2594829 R
|
catcc CGCTTTCCTGTGGTAATCT tcctc
|
-
|
0
|
-
|
|
|
|
|
1.302
|
2594874-2594893 R
|
agctg GCACGGCAAGACAACCGCTC tcgga
|
-
|
0
|
-
|
|
|
|
|
1.101
|
2594774-2594797 R
|
accac CTACGATCATTTCTATAATGAATA tattg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|