|
b2494
|
| |
| Information
for b2494, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2612840-2613901
|
-
|
CDS
|
|
|
putative permease
|
|
2614114-2615577
|
+
|
CDS
|
b2494
|
|
orf; hypothetical protein
|
|
2615598-2615957
|
+
|
CDS
|
|
|
putative oxidoreductase
|
|
| |
Reported regulatory
sites for b2494:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.966
|
2613945-2613966
|
cgcaa TTGTATCGAAATGTCACAAAAA agact
|
-
|
0
|
-
|
|
|
|
|
1.531
|
2613916-2613939
|
ccctg AACCTCAAGAGCGGGATTGCGATC cgcaa
|
-
|
0
|
-
|
|
|
|
|
1.531
|
2614056-2614079
|
ggtgg GAACGATATTTCACAGTATCGGTC aaatg
|
-
|
0
|
-
|
|
|
|
|
1.002
|
2613981-2613997
|
ttttt ATGACGGATTCAGGAAA ctgaa
|
-
|
0
|
-
|
|
|
|
|
1.002
|
2614025-2614041
|
taatc TTCGCCGTTACACTCAA aggcg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|