|
b2511
|
| |
| Information
for b2511, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2633619-2633870
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2633904-2635415
|
-
|
CDS
|
b2511
|
|
putative GTP-binding factor
|
|
2635494-2636672
|
-
|
CDS
|
|
|
putative dehydrogenase
|
|
| |
Reported regulatory
sites for b2511:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.168
|
2635444-2635459 R
|
tcctg GACAGGGGCCGTTTTC ctgtt
|
-
|
0
|
-
|
|
|
|
|
1.241
|
2635457-2635477 R
|
gttca CTTTGAAAACGGCTCCTGGAC agggg
|
-
|
0
|
-
|
|
|
|
|
1.142
|
2635428-2635443 R
|
ttttc CTGTTTTTAACAACGA cgcga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|