b2740
 
Information for b2740, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2862259-2863035
+
CDS
orf; hypothetical protein
2863124-2864488
+
CDS
b2740
putative transport protein
2864582-2865574
-
CDS
RNA polymerase; sigma S (sigma38) factor; synthesis of many growth phase related proteins
 
Reported regulatory sites for b2740:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.925
2863092-2863107
ggggt AGGTTAACTATAACTT tcaga
-
0
-
1.735
2863039-2863058
aattc GTTAAATCCCTAATTACAAC gtacc
-
0
-
0.387
2863063-2863084
cgtac CCATACATCCCCCCATCTACGG atggg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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