|
b2809
|
| |
| Information
for b2809, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2939672-2940589
|
-
|
CDS
|
|
|
positive regulator of gcv operon
|
|
2940940-2941170
|
-
|
CDS
|
b2809
|
|
orf; hypothetical protein
|
|
2941359-2942564
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b2809:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.836
|
2941229-2941245 R
|
catat GCTGAATAGTGTTAGGC gttaa
|
-
|
0
|
-
|
|
|
|
|
2.789
|
2941290-2941307 R
|
gatac AAGGAGAGTGCTAACCAT cagaa
|
-
|
0
|
-
|
|
|
|
|
2.744
|
2941265-2941284 R
|
cagaa TTATCTGGATATCCTGGCGA agccg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|