|
b2810
|
| |
| Information
for b2810, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2940940-2941170
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2941359-2942564
|
+
|
CDS
|
b2810
|
|
orf; hypothetical protein
|
|
2942564-2943007
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b2810:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.885
|
2941226-2941248
|
aaatt AACGCCTAACACTATTCAGCATA tgtta
|
-
|
0
|
-
|
|
|
|
|
1.713
|
2941172-2941187
|
tcatc TTCTCCTTAAAGCGAT taata
|
-
|
0
|
-
|
|
|
|
|
1.555
|
2941200-2941221
|
tctta ATAGTATTGATTAACAGGCTAA aatta
|
-
|
0
|
-
|
|
|
|
|
1.555
|
2941264-2941285
|
gcggc TTCGCCAGGATATCCAGATAAT tctga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|