|
b2817
|
| |
| Information
for b2817, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2945629-2945705
|
+
|
tRNA
|
|
|
Initiator methionine tRNAf1; triplicate gene
|
|
2945779-2947122
|
-
|
CDS
|
b2817
|
|
putative amidase
|
|
2947264-2948595
|
+
|
CDS
|
|
|
N-acetylglutamate synthase; amino acid acetyltransferase
|
|
| |
Reported regulatory
sites for b2817:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.667
|
2947182-2947198 R
|
gtgca AGTGTAAATTTTATGCG agagc
|
-
|
0
|
-
|
|
|
|
|
4.164
|
2947220-2947242 R
|
tgatt ATTCGAAATTAGTGTATTTTTAT tctgt
|
argR
|
20
|
-
|
|
|
|
|
4.164
|
2947129-2947151 R
|
cgtga ATATAAAAAGAATGTTTACCGTT tatta
|
-
|
0
|
-
|
|
|
|
|
0.169
|
2947154-2947175 R
|
gagcg ACTTTTTTATCAGTAATGCCGT gaata
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|