b2899
 
Information for b2899, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3039333-3040313
+
CDS
orf; hypothetical protein
3040509-3041168
-
CDS
b2899
putative oxidoreductase
3041332-3041643
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b2899:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
3041232-3041249
fabR
orf hypothetical protein
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.944
3041307-3041330 R
ttaaa TTGAACTCACGCCTGTTAGTTGAA atttc
-
0
-
6.944
3041229-3041252 R
tttat TTTAGCTAACAGGTGTTCACTGGA actat
fabR
18
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.610
3041171-3041186 R
tgtac GTTTCTCCGGAGTAAG ttatg
-
0
-
1.112
3041257-3041277 R
ttagg AGATTAGTCTCAAATCAGAAT ttatt
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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