|
b2970
|
| |
| Information
for b2970, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3109145-3110005
|
-
|
CDS
|
|
|
putative general secretion pathway for protein export (GSP)
|
|
3110071-3110937
|
-
|
CDS
|
b2970
|
|
putative general secretion pathway for protein export (GSP)
|
|
3111084-3111494
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b2970:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.926
|
3111025-3111045 R
|
ttcgt GACGCACGAATTTATCTCATT caatg
|
-
|
0
|
-
|
|
|
|
|
0.849
|
3110967-3110984 R
|
gagac AATCTCTTAATACAGACA aagag
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.18
|
|
p=0.05
|
2.36
|
|
p=0.1
|
2.00
|
|
p=0.2
|
1.60
|
|
|