|
b2989
|
| |
| Information
for b2989, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3134678-3136537
|
-
|
CDS
|
|
|
glutathionylspermidine synthetase/amidase
|
|
3136694-3137608
|
+
|
CDS
|
b2989
|
|
orf; hypothetical protein
|
|
3137731-3137979
|
-
|
CDS
|
|
|
hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2
|
|
| |
Reported regulatory
sites for b2989:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.789
|
3136620-3136643
|
ggaca GAGGTCAGACTAATCATACACCTC atcgc
|
-
|
0
|
-
|
|
|
|
|
2.177
|
3136597-3136619
|
ttacc TGCTCAGCGACATTAACCGGACA gaggt
|
-
|
0
|
-
|
|
|
|
|
1.437
|
3136586-3136605
|
ttgtg CTCTGATTACCTGCTCAGCG acatt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|