bioB
 
Information for bioB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
807191-808480
-
CDS
7;8-diaminopelargonic acid synthetase
808567-809607
+
CDS
bioB
biotin synthesis; sulfur insertion?
809604-810758
+
CDS
8-amino-7-oxononanoate synthase
 
Reported regulatory sites for bioB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
808487-808521
birA
biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.656
808482-808501
tcata ATCGACTTGTAAACCAAATT gaaaa
birA
15
-
2.656
808508-808527
aaaag ATTTAGGTTTACAAGTCTAC accga
birA
14
-
0.753
808537-808560
aatta ACAACAAAAAACACGTTTTGGAGA agccc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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