|
cdsA
|
| |
| Information
for cdsA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
194903-195664
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
195785-196534
|
+
|
CDS
|
cdsA
|
|
CDP-diglyceride synthetase
|
|
196546-197898
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for cdsA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.624
|
195679-195702
|
ctttt GCTGAAGTATCGCCTGATATCTGC ttttg
|
-
|
0
|
-
|
|
|
|
|
2.624
|
195709-195732
|
tttgt GTTAATACCCGTCGTCATCGCGGC gttgt
|
-
|
0
|
-
|
|
|
|
|
1.137
|
195758-195774
|
tgggg TTCGCCATTGTAACGCT ggtgg
|
-
|
0
|
-
|
|
|
|
|
0.106
|
195742-195760
|
tttct GTTGCCGCCGGTGGGGTTC gccat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|