|
celA
|
| |
| Information
for celA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1817880-1819238
|
-
|
CDS
|
|
|
PEP-dependent phosphotransferase enzyme II for cellobiose; arbutin; and salicin
|
|
1819323-1819643
|
-
|
CDS
|
celA
|
|
PEP-dependent phosphotransferase enzyme IV for cellobiose; arbutin; and salicin
|
|
1819942-1820280
|
-
|
CDS
|
|
|
activator of ntrL gene
|
|
| |
Reported regulatory
sites for celA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.833
|
1819888-1819911 R
|
caacg GAAACCGGCCATTGCGCCGGTTTT ttttg
|
-
|
0
|
-
|
|
|
|
|
4.833
|
1819644-1819667 R
|
gacag ATAATCGTCGATGAGGGCAGTTTT atgga
|
-
|
0
|
-
|
|
|
|
|
3.056
|
1819850-1819871 R
|
gttct TAATTATCTTCGCGAATTATTT gcccg
|
-
|
0
|
-
|
|
|
|
|
3.056
|
1819784-1819805 R
|
gaaac AATTTATAAGGTCAAAGAAATA ctatt
|
-
|
0
|
-
|
|
|
|
|
2.440
|
1819691-1819714 R
|
gttac CCAGAGCATGGAAGCAGGTTAAGG cttgc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|