|
celB
|
| |
| Information
for celB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1817479-1817829
|
-
|
CDS
|
|
|
PEP-dependent phosphotransferase enzyme III for cellobiose; arbutin; and salicin
|
|
1817880-1819238
|
-
|
CDS
|
celB
|
|
PEP-dependent phosphotransferase enzyme II for cellobiose; arbutin; and salicin
|
|
1819323-1819643
|
-
|
CDS
|
|
|
PEP-dependent phosphotransferase enzyme IV for cellobiose; arbutin; and salicin
|
|
| |
Reported regulatory
sites for celB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.146
|
1819290-1819313 R
|
tttta AATTTTCCCGTCAAAGAGTTATTT cataa
|
-
|
0
|
-
|
|
|
|
|
4.146
|
1819243-1819266 R
|
tattt AAATTGCGGTTTTTAAGGGTATTT ttcta
|
-
|
0
|
-
|
|
|
|
|
0.383
|
1819267-1819285 R
|
tcata AATCAATACCGCAATATTT aaatt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|