cmk
 
Information for cmk, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
959463-960251
+
CDS
putative heat shock protein
960424-961107
+
CDS
cmk
cytidylate kinase
961218-962891
+
CDS
30S ribosomal subunit protein S1
 
Reported regulatory sites for cmk:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.839
960318-960338
atctg AATACAGACAAAACTGGTTTT tgcac
-
0
-
1.750
960286-960302
gccag CCCGCTATAATTGCGCA ataaa
-
0
-
1.750
960368-960384
gcgtc GGCGCGTATAATGCGCG cggtt
-
0
-
1.255
960249-960268
gtaag TAAATCATTGTCATCTTTCG ggctg
-
0
-
1.255
960393-960412
ttatg TTAACGGTACGCCTGTTTTA aggag
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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