cmr
 
Information for cmr, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
882015-882611
-
CDS
orf; hypothetical protein
882896-884128
+
CDS
cmr
proton motive force efflux pump
884169-884453
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for cmr:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.538
882866-882888
aaact CTGCGCGATTATTATTGGCGAAG aaatt
-
0
-
2.231
882806-882824
aatgt GCTTAACCGTGGTTTCAGC tacaa
-
0
-
1.939
882750-882766
gggca TAGGTTAAATAAAACTT aaaga
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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