|
corA
|
| |
| Information
for corA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3998183-3998668
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
3999038-3999988
|
+
|
CDS
|
corA
|
|
Mg2+ transport; system I
|
|
4000031-4000411
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for corA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.186
|
3998877-3998893
|
aggat CAACTCCTAAGGCTATC ccttt
|
-
|
0
|
-
|
|
|
|
|
3.186
|
3998904-3998920
|
ttgct GATAGCCTTAGCGGTTG tcagc
|
-
|
0
|
-
|
|
|
|
|
3.077
|
3998697-3998719
|
tttta TCCTGTTAGCGACCTTGACGAGT accaa
|
-
|
0
|
-
|
|
|
|
|
3.077
|
3998825-3998847
|
gacat TCGCCTTGGACACACCCAGTAGA tactg
|
-
|
0
|
-
|
|
|
|
|
2.852
|
3998723-3998738
|
gtacc AAAAAGCGCGAAGTTC aacta
|
-
|
0
|
-
|
|
|
|
|
2.852
|
3998793-3998808
|
ggcgt AACATGCGCGCACGAT cactc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|