corA
 
Information for corA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3998183-3998668
-
CDS
orf; hypothetical protein
3999038-3999988
+
CDS
corA
Mg2+ transport; system I
4000031-4000411
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for corA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.186
3998877-3998893
aggat CAACTCCTAAGGCTATC ccttt
-
0
-
3.186
3998904-3998920
ttgct GATAGCCTTAGCGGTTG tcagc
-
0
-
3.077
3998697-3998719
tttta TCCTGTTAGCGACCTTGACGAGT accaa
-
0
-
3.077
3998825-3998847
gacat TCGCCTTGGACACACCCAGTAGA tactg
-
0
-
2.852
3998723-3998738
gtacc AAAAAGCGCGAAGTTC aacta
-
0
-
2.852
3998793-3998808
ggcgt AACATGCGCGCACGAT cactc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

Click here to go back