csiE
 
Information for csiE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2662383-2663264
+
CDS
putative enzyme (3.4.-)
2663434-2664735
+
CDS
csiE
orf; hypothetical protein
2664727-2665866
-
CDS
MFS (major facilitator superfamily) transporter
 
Reported regulatory sites for csiE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.012
2663363-2663386
acgct TGCCAACATTTCTGATGATTAGCA ttccc
-
0
-
2.012
2663407-2663430
ccttg AGCAAACTTTAGCTATTCTTATCA attat
-
0
-
1.738
2663341-2663359
ttaag ATGAGAAAAATTCTGTGAC gcttg
-
0
-
0.910
2663320-2663336
taatc CACTGGTCAGAACAGTT taaga
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

Click here to go back