|
cutA
|
| |
| Information
for cutA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4360923-4362620
|
-
|
CDS
|
|
|
thiol:disulfide interchange protein; copper tolerance
|
|
4362596-4362934
|
-
|
CDS
|
cutA
|
|
divalent cation tolerance protein; cytochrome c biogenesis
|
|
4363050-4364351
|
-
|
CDS
|
|
|
anaerobic dicarboxylate transport
|
|
| |
Reported regulatory
sites for cutA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.321
|
4363021-4363039 R
|
aatcg CGGGGCGTTCACGCCCCGC tttct
|
-
|
0
|
-
|
|
|
|
|
2.202
|
4362973-4362989 R
|
ccccc GTCCGTTGTATAGTGAC ctctc
|
-
|
0
|
-
|
|
|
|
|
1.981
|
4362962-4362981 R
|
cgttg TATAGTGACCTCTCTCTTGC ggttc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|