cycA
 
Information for cycA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4426354-4427133
+
CDS
FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)
4427442-4428854
+
CDS
cycA
transport of D-alanine; D-serine; and glycine
4428899-4429561
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for cycA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.465
4427285-4427306
cactc ACTTTAAACATAAAATTAACAT tagat
-
0
-
3.465
4427310-4427331
attag ATCTAAATCTTAGTATTCATCC cgcgt
-
0
-
2.308
4427260-4427280
gtttc GCGTTATCACCGTGATATGAC actca
-
0
-
1.879
4427337-4427359
cgcgt ATTGTTACCTAATATCGATGAGT cccga
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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