cysD
 
Information for cysD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2872015-2873442
-
CDS
ATP-sulfurylase (ATP:sulfate adenylyltransferase); subunit 1; probably a GTPase
2873444-2874352
-
CDS
cysD
ATP:sulfurylase (ATP:sulfate adenylyltransferase); subunit 2
2874604-2875641
+
CDS
alkaline phosphatase isozyme conversion; aminopeptidase
 
Reported regulatory sites for cysD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.471
2874482-2874501 R
cggtg CCTTAAGCACTTTTTGATAT tagct
-
0
-
1.471
2874440-2874459 R
tattc CGTTAAGGAACTACTCATTC taatt
-
0
-
0.645
2874505-2874522 R
tcttc CTAAACGCCCGAAATCCG gtgcc
-
0
-
0.377
2874560-2874575 R
aattt TTTTACCGCCATAGTA tgaaa
-
0
-
0.377
2874538-2874553 R
gaaac TGCCGCTGCGCTAAAA caatt
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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