cysK
 
Information for cysK, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2529483-2530244
+
CDS
required for sulfate transport
2530429-2531400
+
CDS
cysK
cysteine synthase A; O-acetylserine sulfhydrolase A
2531784-2532041
+
CDS
PTS system protein HPr
 
Reported regulatory sites for cysK:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2530280-2530319
cysB
positive transcriptional regulator for cysteine regulon
2530324-2530363
cysB
positive transcriptional regulator for cysteine regulon
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.106
2530330-2530349
tattt CCCTTCTGTATATAGATATG ctaaa
cysB
20
-
3.106
2530401-2530420
tgtat CCCAATTTCATACAGTTAAG gacag
-
0
-
1.420
2530350-2530365
atatg CTAAATCCTTACTTCC gcata
cysB
14
-
1.123
2530367-2530387
ttccg CATATTCTCTGAGCGGGTATG ctacc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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