|
cysK
|
| |
| Information
for cysK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2529483-2530244
|
+
|
CDS
|
|
|
required for sulfate transport
|
|
2530429-2531400
|
+
|
CDS
|
cysK
|
|
cysteine synthase A; O-acetylserine sulfhydrolase A
|
|
2531784-2532041
|
+
|
CDS
|
|
|
PTS system protein HPr
|
|
| |
Reported regulatory
sites for cysK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
2530280-2530319
|
|
cysB
|
positive transcriptional regulator for cysteine regulon
|
|
2530324-2530363
|
|
cysB
|
positive transcriptional regulator for cysteine regulon
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.106
|
2530330-2530349
|
tattt CCCTTCTGTATATAGATATG ctaaa
|
cysB
|
20
|
-
|
|
|
|
|
3.106
|
2530401-2530420
|
tgtat CCCAATTTCATACAGTTAAG gacag
|
-
|
0
|
-
|
|
|
|
|
1.420
|
2530350-2530365
|
atatg CTAAATCCTTACTTCC gcata
|
cysB
|
14
|
-
|
|
|
|
|
1.123
|
2530367-2530387
|
ttccg CATATTCTCTGAGCGGGTATG ctacc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|