cysQ
 
Information for cysQ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4432200-4434143
-
CDS
2':3'-cyclic-nucleotide 2'-phosphodiesterase
4434333-4435073
+
CDS
cysQ
affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis
4435285-4435785
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for cysQ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.964
4434306-4434322
gttaa CACCGCTCACAGAGACG aggtg
-
0
-
0.750
4434156-4434172
atcct TTTATCATCGGGAATAC gaaag
-
0
-
0.750
4434272-4434288
attca TTAACGATAGGGTATAA gtaaa
-
0
-
0.538
4434212-4434233
aacag TGAAGAATGCCACAATTTTACG ctttg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back