cysS
 
Information for cysS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
553166-553660
-
CDS
peptidyl-prolyl cis-trans isomerase B (rotamase B)
553834-555219
+
CDS
cysS
cysteine tRNA synthetase
555255-555776
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for cysS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.515
553780-553800
gggaa ATATGGGTATTATACGCAACT caatt
-
0
-
1.740
553804-553827
ctcaa TTACCCACACATGTCTAAACGGAA tcttc
-
0
-
0.792
553709-553729
ggtca TATATAGGGTGGTGTTATAGC ataac
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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