dapA
 
Information for dapA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2595851-2596888
-
CDS
lipoprotein-34
2596902-2597780
-
CDS
dapA
dihydrodipicolinate synthase
2597860-2598498
+
CDS
transcriptional regulation of gcv operon
 
Reported regulatory sites for dapA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.615
2597820-2597840 R
tctgc TTGCTTTTAATGCCATACCAA acgta
-
0
-
1.911
2597808-2597823 R
ccata CCAAACGTACCATTGA gacac
-
0
-
0.912
2597795-2597810 R
accat TGAGACACTTGTTTGC acaga
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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