|
dcuA
|
| |
| Information
for dcuA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4362596-4362934
|
-
|
CDS
|
|
|
divalent cation tolerance protein; cytochrome c biogenesis
|
|
4363050-4364351
|
-
|
CDS
|
dcuA
|
|
anaerobic dicarboxylate transport
|
|
4364469-4365950
|
-
|
CDS
|
|
|
aspartate ammonia-lyase (aspartase)
|
|
| |
Reported regulatory
sites for dcuA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.485
|
4364366-4364388 R
|
aacaa TCTAATATCAACTTGTTAAAAAA caagg
|
-
|
0
|
-
|
|
|
|
|
2.794
|
4364448-4364471 R
|
aacag TAATCGTACAGGGTAGTACAAATA aaaaa
|
-
|
0
|
-
|
|
|
|
|
1.466
|
4364422-4364444 R
|
taaaa AAGGCACGTCAGATGACGTGCCT ttttt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|