dcuB
 
Information for dcuB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4343258-4344904
-
CDS
fumarase B= fumarate hydratase Class I; anaerobic isozyme
4344982-4346322
-
CDS
dcuB
anaerobic dicarboxylate transport
4346893-4347612
-
CDS
putative 2-component transcriptional regulator
 
Reported regulatory sites for dcuB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.562
4346338-4346357 R
tcagc AAAAATTTAAATAGGATTAT cgcga
-
0
-
1.237
4346794-4346809 R
taaaa CTTGTGCCAGATCAAA tataa
-
0
-
0.971
4346515-4346533 R
atcgc CAGAGAGTCTTTCTCTCTG aaaaa
-
0
-
 
Critical MAP values:
p=0.01
5.40
p=0.05
4.29
p=0.1
3.77
p=0.2
3.19

Click here to go back