|
dinG
|
| |
| Information
for dinG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
831691-832173
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
832293-834443
|
+
|
CDS
|
dinG
|
|
probably ATP-dependent helicase
|
|
834471-835433
|
+
|
CDS
|
|
|
putative enzyme
|
|
| |
Reported regulatory
sites for dinG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
832259-832278
|
|
lexA
|
regulator for SOS(lexA) regulon
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.643
|
832257-832280
|
gccac AATATTGGCTGTTTATACAGTATT tcagg
|
lexA
|
20
|
-
|
|
|
|
|
1.615
|
832209-832225
|
gccgc TTTCCAGAAACAGAAAA accat
|
-
|
0
|
-
|
|
|
|
|
0.873
|
832275-832291
|
tatac AGTATTTCAGGTTTTCT catgg
|
lexA
|
4
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|