|
dinI
|
| |
| Information
for dinI, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1119924-1120178
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1120465-1120710
|
-
|
CDS
|
dinI
|
|
damage-inducible protein I
|
|
1120784-1121830
|
-
|
CDS
|
|
|
dihydro-orotase
|
|
| |
Reported regulatory
sites for dinI:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
1120730-1120749
|
|
lexA
|
regulator for SOS(lexA) regulon
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.664
|
1120731-1120748 R
|
tttta CCTGTATAAATAACCAGT atatt
|
lexA
|
18
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.007
|
1120712-1120730 R
|
ccagt ATATTCAACAGGGGGCTAT tatgc
|
lexA
|
1
|
-
|
|
|
|
|
0.445
|
1120764-1120785 R
|
acaat AAAAATCGTAGCTTCCTGTTGT catta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|